Gene: PGSC0003DMG400002627

General Information

Structural Information

  • Species Solanum tuberosum
  • Gene Identifier PGSC0003DMG400002627
  • Transcript Identifier PGSC0003DMT400006770
  • Gene Type Coding gene
  • Location ST4.03ch03 : 60116956-60123600 : positive

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pacid 37461007
  • id PGSC0003DMG400002627.v4.03
  • uniprot M0ZRY5

Descriptions

  • Description Homeobox protein
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0009957
ISO
PLAZA Integrative Orthologyepidermal cell fate specification AT1G79840
GO:0010062
ISO
PLAZA Integrative Orthologynegative regulation of trichoblast fate specification AT1G79840

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008289
IEA
GOA Databaselipid binding
GO:0008289
IEA
InterProlipid binding
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0000981
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G79840
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT1G79840

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023393 START-like domain superfamily
IPR002913 START domain
IPR009057 Homeobox-like domain superfamily
IPR001356 Homeobox domain
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)