Gene: PGR142G0046
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR142G0046
- Transcript Identifier PGR142G0046.03
- Gene Type Coding gene
- Location NC_045128.1 : 41952176-41956510 : negative
Gene Family Information
- ID HOM05D000109
- #Genes/#Species 3058/96
- Phylogenetic origin
- ID ORTHO05D000520
- #Genes/#Species 818/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pid XP_031380468.1
- name LOC116195427
- name XM_031524608.1
- id gene-LOC116195427
- uniprot A0A6P8CDH0
Descriptions
- product glutamate receptor 3.5-like, transcript variant X1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0070417 | ISO | PLAZA Integrative Orthology | cellular response to cold | AT1G05200 |
| GO:0019722 | ISO | PLAZA Integrative Orthology | calcium-mediated signaling | AT1G05200 |
| GO:0071215 | ISO | PLAZA Integrative Orthology | cellular response to abscisic acid stimulus | AT1G05200 |
| GO:0006816 | ISO | PLAZA Integrative Orthology | calcium ion transport | AT1G05200 |
| GO:0071311 | ISO | PLAZA Integrative Orthology | cellular response to acetate | AT1G05200 |
| GO:0070584 | ISO | PLAZA Integrative Orthology | mitochondrion morphogenesis | AT2G32390 |
| GO:0071260 | ISO | PLAZA Integrative Orthology | cellular response to mechanical stimulus | AT1G05200 |
| GO:0071230 | ISO | PLAZA Integrative Orthology | cellular response to amino acid stimulus | AT1G05200 |
| GO:0009845 | ISO | PLAZA Integrative Orthology | seed germination | AT2G32390 |
| GO:0009611 | ISO | PLAZA Integrative Orthology | response to wounding | AT1G05200 |
| GO:0006811 | IEA | GOA Database | ion transport | |
| GO:0034220 | IEA | GOA Database | ion transmembrane transport |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT1G05200 |
| GO:0005216 | ISO | PLAZA Integrative Orthology | ion channel activity | AT2G32390 |
| GO:0015276 | IEA | GOA Database | ligand-gated ion channel activity | |
| GO:0015276 | IEA | InterPro | ligand-gated ion channel activity | |
| GO:0005262 | ISO | PLAZA Integrative Orthology | calcium channel activity | AT1G05200 |
| GO:0008066 | ISO | PLAZA Integrative Orthology | glutamate receptor activity | Solyc07g052400.3 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005886 | ISO | PLAZA Integrative Orthology | plasma membrane | AT1G05200 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT2G32390 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT2G32390 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT1G05200 |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016020 | IEA | InterPro | membrane |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001320 | Ionotropic glutamate receptor |
| IPR028082 | Periplasmic binding protein-like I |
| IPR001828 | Receptor, ligand binding region |
| IPR001638 | Solute-binding protein family 3/N-terminal domain of MltF |
| IPR017103 | Ionotropic glutamate receptor, plant |
| IPR044440 | Plant glutamate receptor, periplasmic ligand-binding domain |
| Mapman id | Description |
|---|---|
| 24.3.9 | Solute transport.channels.ligand-gated cation channel (GLR) |