Gene: PGR102G1959

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR102G1959
  • Transcript Identifier PGR102G1959.01
  • Gene Type Coding gene
  • Location NC_045129.1 : 13644447-13647598 : positive

Gene Family Information

  • ID HOM05D002499
  • #Genes/#Species 272/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031385927.1
  • name LOC116199626
  • name XM_031530067.1
  • id gene-LOC116199626
  • uniprot A0A6P8CNM5

Descriptions

  • product BRAP2 RING ZnF UBP domain-containing protein 2, transcript variant X1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010029
ISO
PLAZA Integrative Orthologyregulation of seed germination AT2G26000
GO:0016567
ISO
PLAZA Homology (enrichment)protein ubiquitination HOM05D002499

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0008270
IEA
GOA Databasezinc ion binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0004842
ISO
PLAZA Integrative Orthologyubiquitin-protein transferase activity AT2G26000
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G26000
GO:0043130
ISO
PLAZA Integrative Orthologyubiquitin binding AT2G26000
GO:0046982
ISO
PLAZA Integrative Orthologyprotein heterodimerization activity AT2G26000

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016021
IEA
GOA Databaseintegral component of membrane
GO:0016020
IEA
GOA Databasemembrane
GO:0000151
ISO
PLAZA Integrative Orthologyubiquitin ligase complex AT2G26000

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011422 BRCA1-associated 2
IPR001841 Zinc finger, RING-type
IPR013083 Zinc finger, RING/FYVE/PHD-type
IPR001607 Zinc finger, UBP-type
IPR035979 RNA-binding domain superfamily
Mapman id Description
19.2.2.1.4.3.3.4 Protein homeostasis.ubiquitin-proteasome system.ubiquitin-fold protein conjugation.ubiquitin conjugation (ubiquitylation).ubiquitin-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-class ligase activities.ubiquitin protein ligase (BRIZ)