Gene: PGR044G0307

General Information

Structural Information

  • Species Punica granatum
  • Gene Identifier PGR044G0307
  • Transcript Identifier PGR044G0307.01
  • Gene Type Coding gene
  • Location NC_045134.1 : 23171775-23176385 : negative

Gene Family Information

  • ID HOM05D001060
  • #Genes/#Species 575/98
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • pid XP_031371967.1
  • name LOC116187422
  • name XM_031516107.1
  • id gene-LOC116187422
  • uniprot A0A6P8BN04

Descriptions

  • product phytochrome C
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0050896
IEA
GOA Databaseresponse to stimulus
GO:0007165
ISO
PLAZA Homology (enrichment)signal transduction HOM05D001060
GO:0017006
IEA
GOA Databaseprotein-tetrapyrrole linkage
GO:0017006
IEA
InterProprotein-tetrapyrrole linkage
GO:0009585
IEA
GOA Databasered, far-red light phototransduction
GO:0009585
IEA
InterProred, far-red light phototransduction
GO:0009584
IEA
GOA Databasedetection of visible light
GO:0009584
IEA
InterProdetection of visible light
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0018298
IEA
GOA Databaseprotein-chromophore linkage
GO:0018298
IEA
InterProprotein-chromophore linkage

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000155
ISO
PLAZA Homology (enrichment)phosphorelay sensor kinase activity HOM05D001060
GO:0042803
IEA
GOA Databaseprotein homodimerization activity
GO:0042803
IEA
InterProprotein homodimerization activity
GO:0009881
IEA
GOA Databasephotoreceptor activity
GO:0009881
IEA
InterProphotoreceptor activity
GO:0005515
IEA
InterProprotein binding

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR035965 PAS domain superfamily
IPR000014 PAS domain
IPR043150 Phytochrome, PHY domain
IPR013767 PAS fold
IPR001294 Phytochrome
IPR003594 Histidine kinase/HSP90-like ATPase
IPR013654 PAS fold-2
IPR012129 Phytochrome A/B/C/D/E
IPR003018 GAF domain
IPR036890 Histidine kinase/HSP90-like ATPase superfamily
IPR013515 Phytochrome, central region
IPR029016 GAF-like domain superfamily
IPR044767 Phytochrome A/B/C/D/E-like, histidine-kinase-related domain
Mapman id Description
26.1.1.1 External stimuli response.light.red/far red light.phytochrome photoreceptor (PHY)