Gene: PGR042G3399
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G3399
- Transcript Identifier PGR042G3399.01
- Gene Type Coding gene
- Location NC_045130.1 : 37894924-37899090 : negative
Gene Family Information
- ID HOM05D001073
- #Genes/#Species 570/97
- Phylogenetic origin
- ID ORTHO05D002392
- #Genes/#Species 292/90
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- pid XP_031393059.1
- name LOC116204861
- name XM_031537199.1
- id gene-LOC116204861
- uniprot A0A6P8DMP6
Descriptions
- product two-component response regulator-like APRR5, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000160 | IEA | GOA Database | phosphorelay signal transduction system | |
| GO:0000160 | IEA | InterPro | phosphorelay signal transduction system | |
| GO:0048511 | IEA | GOA Database | rhythmic process | |
| GO:0009266 | ISO | PLAZA Integrative Orthology | response to temperature stimulus | AT2G46790 |
| GO:0045892 | ISO | PLAZA Integrative Orthology | negative regulation of transcription, DNA-templated | AT2G46790 |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT5G24470 |
| GO:0010218 | ISO | PLAZA Integrative Orthology | response to far red light | AT5G24470 |
| GO:0010017 | ISO | PLAZA Integrative Orthology | red or far-red light signaling pathway | AT2G46790 |
| GO:0006355 | ISO | PLAZA Integrative Orthology | regulation of transcription, DNA-templated | AT2G46790 |
| GO:0051170 | ISO | PLAZA Integrative Orthology | import into nucleus | AT5G24470 |
| GO:0007623 | ISO | PLAZA Integrative Orthology | circadian rhythm | AT2G46790 |
| GO:0010114 | ISO | PLAZA Integrative Orthology | response to red light | AT5G24470 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003677 | ISO | PLAZA Integrative Orthology | DNA binding | AT2G46790 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT5G24470 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 27.1.4 | Multi-process regulation.circadian clock system.time-of-day-dependent expressed repressor (PRR) |