Gene: PGR042G1443
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR042G1443
- Transcript Identifier PGR042G1443.02
- Gene Type Coding gene
- Location NC_045130.1 : 18986409-18989353 : positive
Gene Family Information
- ID HOM05D001198
- #Genes/#Species 522/96
- Phylogenetic origin
- ID ORTHO05D001599
- #Genes/#Species 383/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031393813.1
- name LOC116205368
- name XM_031537953.1
- id gene-LOC116205368
- uniprot A0A6P8D9N1
Descriptions
- product APO protein 1, chloroplastic-like, transcript variant X2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0000373 | ISO | PLAZA Integrative Orthology | Group II intron splicing | AT1G64810 |
| GO:0010468 | ISO | PLAZA Integrative Orthology | regulation of gene expression | AT1G64810 |
| GO:0015979 | ISO | PLAZA Integrative Orthology | photosynthesis | AT1G64810 |
| GO:0009658 | ISO | PLAZA Integrative Orthology | chloroplast organization | AT1G64810 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003723 | IEA | GOA Database | RNA binding | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0008270 | ISO | PLAZA Integrative Orthology | zinc ion binding | AT1G64810 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT1G64810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR023342 | APO domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |