Gene: PGR004G2893
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR004G2893
- Transcript Identifier PGR004G2893.01
- Gene Type Coding gene
- Location NC_045131.1 : 9728258-9730344 : positive
Gene Family Information
- ID HOM05D000125
- #Genes/#Species 2751/82
- Phylogenetic origin
- ID ORTHO05D000120
- #Genes/#Species 1883/61
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- pid XP_031399210.1
- name LOC116209641
- name XM_031543350.1
- id gene-LOC116209641
- uniprot A0A2I0I552
Descriptions
- product uncharacterized LOC116209641, transcript variant X7
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009651 | ISO | PLAZA Integrative Orthology | response to salt stress | AT5G17960 |
| GO:0009793 | ISO | PLAZA Integrative Orthology | embryo development ending in seed dormancy | AT4G10560 |
| GO:0009561 | ISO | PLAZA Integrative Orthology | megagametogenesis | AT1G55420 |
| GO:0009411 | ISO | PLAZA Integrative Orthology | response to UV | AT5G17960 |
| GO:0009751 | ISO | PLAZA Integrative Orthology | response to salicylic acid | AT5G17960 |
| GO:0009414 | ISO | PLAZA Integrative Orthology | response to water deprivation | AT5G17960 |
| GO:0009409 | ISO | PLAZA Integrative Orthology | response to cold | AT2G13950 |
| GO:0009739 | ISO | PLAZA Integrative Orthology | response to gibberellin | AT5G17960 |
| GO:0010029 | ISO | PLAZA Integrative Orthology | regulation of seed germination | AT3G27490 |
| GO:2000033 | ISO | PLAZA Integrative Orthology | regulation of seed dormancy process | AT3G27490 |
| GO:0010200 | ISO | PLAZA Integrative Orthology | response to chitin | AT5G17960 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G43220 |
| GO:0042393 | ISO | PLAZA Integrative Orthology | histone binding | AT3G27490 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT4G13130 |
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G13950 |
| GO:0009506 | ISO | PLAZA Integrative Orthology | plasmodesma | AT1G65180 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR004146 | DC1 |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |