Gene: PGR004G2203
General Information
Structural Information
- Species Punica granatum
- Gene Identifier PGR004G2203
- Transcript Identifier PGR004G2203.01
- Gene Type Coding gene
- Location NC_045131.1 : 4893815-4895432 : negative
Gene Family Information
- ID HOM05D000297
- #Genes/#Species 1509/99
- Phylogenetic origin
- ID ORTHO05D000193
- #Genes/#Species 1419/99
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- pid XP_031398004.1
- name LOC116208613
- name XM_031542144.1
- id gene-LOC116208613
- uniprot A0A6P8DUE7
Descriptions
- product nuclear transcription factor Y subunit B-3-like
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0045944 | IEA | GOA Database | positive regulation of transcription by RNA polymerase II | |
| GO:0048579 | ISO | PLAZA Integrative Orthology | negative regulation of long-day photoperiodism, flowering | Os08g0174500 |
| GO:0051512 | ISO | PLAZA Integrative Orthology | positive regulation of unidimensional cell growth | Os08g0174500 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046982 | IEA | GOA Database | protein heterodimerization activity | |
| GO:0046982 | IEA | InterPro | protein heterodimerization activity | |
| GO:0001228 | IEA | GOA Database | DNA-binding transcription activator activity, RNA polymerase II-specific | |
| GO:0001228 | IEA | InterPro | DNA-binding transcription activator activity, RNA polymerase II-specific | |
| GO:0043565 | IEA | GOA Database | sequence-specific DNA binding | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | Os08g0174500 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0016602 | IEA | GOA Database | CCAAT-binding factor complex | |
| GO:0016602 | IEA | InterPro | CCAAT-binding factor complex | |
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005737 | ISO | PLAZA Integrative Orthology | cytoplasm | Os08g0174500 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 15.5.49.2 | RNA biosynthesis.transcriptional regulation.NF-Y transcription factor complex.component NF-YB |