Gene: Os12g0589000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os12g0589000
  • Transcript Identifier Os12t0589000-00
  • Gene Type Coding gene
  • Location chr12 : 24632487-24633776 : negative

Gene Family Information

  • ID HOM05D001118
  • #Genes/#Species 550/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os12t0589000-00
  • MSU-ID LOC_Os12g39850.1
  • uniprot Q2QMV9

Descriptions

  • Description Similar to Helix-loop-helix DNA-binding domain containing protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IC
GOA Databaseregulation of transcription, DNA-templated
GO:0006357
IBA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT1G27740
GO:0048766
ISO
PLAZA Integrative Orthologyroot hair initiation AT4G33880
GO:0009733
ISO
PLAZA Integrative Orthologyresponse to auxin AT4G33880

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0000981
IBA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0000978
IBA
GOA DatabaseRNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT1G27740

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IC
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)