Gene: Os12g0160400
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os12g0160400
- Transcript Identifier Os12t0160400-01
- Gene Type Coding gene
- Location chr12 : 3024382-3029051 : positive
Gene Family Information
- ID HOM05D000978
- #Genes/#Species 614/95
- Phylogenetic origin
- ID ORTHO05D000813
- #Genes/#Species 601/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os12t0160400-01
- MSU-ID LOC_Os12g06330.2
- MSU-ID LOC_Os12g06330.1
- MSU-ID LOC_Os12g06335.1
- uniprot Q0IPY1
Descriptions
- Description Basic helix-loop-helix dimerisation region bHLH domain containing protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006355 | IBA IEA | GOA Database | regulation of transcription, DNA-templated | |
| GO:0006355 | IEA | InterPro | regulation of transcription, DNA-templated | |
| GO:0048364 | ISO | PLAZA Integrative Orthology | root development | AT2G27230 |
| GO:0045893 | ISO | PLAZA Integrative Orthology | positive regulation of transcription, DNA-templated | AT2G27230 |
| GO:0010479 | ISO | PLAZA Integrative Orthology | stele development | AT2G27230 |
| GO:0010078 | ISO | PLAZA Integrative Orthology | maintenance of root meristem identity | AT2G27230 |
| GO:0010089 | ISO | PLAZA Integrative Orthology | xylem development | AT2G27230 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0046983 | IEA | GOA Database | protein dimerization activity | |
| GO:0003700 | IEA | GOA Database | DNA-binding transcription factor activity | |
| GO:0003700 | IEA | InterPro | DNA-binding transcription factor activity | |
| GO:0042803 | ISO | PLAZA Integrative Orthology | protein homodimerization activity | AT2G27230 |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT2G31280 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Integrative Orthology | nucleus | AT2G27230 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |