Gene: Os11g0682300

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0682300
  • Transcript Identifier Os11t0682300-01
  • Gene Type Coding gene
  • Location chr11 : 27591032-27593235 : positive

Gene Family Information

  • ID HOM05D273029
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin
  • ID ORTHO05D296022
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0682300-01
  • MSU-ID LOC_Os11g45590.1
  • MSU-ID LOC_Os11g45590.2
  • MSU-ID LOC_Os11g45590.3
  • uniprot Q2QZL4

Descriptions

  • Description Similar to Splicing factor U2af large subunit B.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
GOA DatabaseRNA binding
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0008187
IBA
GOA Databasepoly-pyrimidine tract binding
GO:0030628
IBA
GOA Databasepre-mRNA 3'-splice site binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0089701
IBA
GOA DatabaseU2AF complex
GO:0016607
IBA
GOA Databasenuclear speck
GO:0000243
IBA
GOA Databasecommitment complex
GO:0071004
IBA
GOA DatabaseU2-type prespliceosome

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
No InterPro domains detected for this gene.
Mapman id Description
35.2 not assigned.not annotate