Gene: Os11g0657300

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0657300
  • Transcript Identifier Os11t0657300-01
  • Gene Type Coding gene
  • Location chr11 : 26313160-26314904 : positive

Gene Family Information

  • ID HOM05D000854
  • #Genes/#Species 698/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0657300-01
  • MSU-ID LOC_Os11g43620.2
  • MSU-ID LOC_Os11g43620.1
  • uniprot Q2R066

Descriptions

  • Description Similar to Small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006397
IEA
GOA DatabasemRNA processing
GO:0008380
IEA
GOA DatabaseRNA splicing
GO:0000387
IEA
GOA Databasespliceosomal snRNP assembly
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0000398
IBA
IEA
GOA DatabasemRNA splicing, via spliceosome
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IBA
IEA
GOA DatabaseRNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus
GO:0005681
IEA
GOA Databasespliceosomal complex
GO:0005681
IEA
InterProspliceosomal complex
GO:0071013
IBA
GOA Databasecatalytic step 2 spliceosome
GO:0005685
IBA
GOA DatabaseU1 snRNP

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR016487 Sm-like protein Lsm6/SmF
IPR001163 LSM domain, eukaryotic/archaea-type
IPR010920 LSM domain superfamily
IPR034100 Small nuclear ribonucleoprotein F
Mapman id Description
16.2.2.6 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-F