Gene: Os11g0200000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os11g0200000
  • Transcript Identifier Os11t0200000-01
  • Gene Type Coding gene
  • Location chr11 : 5028019-5029389 : negative

Gene Family Information

  • ID HOM05D001141
  • #Genes/#Species 542/100
  • Phylogenetic origin
  • ID ORTHO05D293696
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os11t0200000-01
  • MSU-ID LOC_Os11g09370.1
  • uniprot Q2R9B1

Descriptions

  • Description Histone deacetylase family protein.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070932
IEA
GOA Databasehistone H3 deacetylation
GO:0006325
IEA
GOA Databasechromatin organization
GO:0016575
IEA
GOA Databasehistone deacetylation
GO:0016575
IEA
InterProhistone deacetylation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004407
IEA
GOA Databasehistone deacetylase activity
GO:0004407
IEA
InterProhistone deacetylase activity
GO:0032041
IEA
GOA DatabaseNAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016787
IEA
GOA Databasehydrolase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000286 Histone deacetylase family
IPR037138 Histone deacetylase domain superfamily
IPR023801 Histone deacetylase domain
IPR003084 Histone deacetylase
IPR023696 Ureohydrolase domain superfamily
Mapman id Description
12.3.2.1.1.3 Chromatin organisation.post-translational histone modification.histone deacetylation.HD1 histone deacetylase family.class-I histone deacetylase activities.histone deacetylase (HDA8)