Gene: Os10g0556200

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os10g0556200
  • Transcript Identifier Os10t0556200-01
  • Gene Type Coding gene
  • Location chr10 : 21863404-21867523 : negative

Gene Family Information

  • ID HOM05D000627
  • #Genes/#Species 910/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os10t0556200-01
  • MSU-ID LOC_Os10g40740.1
  • uniprot Q94LR3

Descriptions

  • Description Hypothetical conserved gene.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0090351
ISO
PLAZA Integrative Orthologyseedling development AT4G00050
GO:0010218
ISO
PLAZA Integrative Orthologyresponse to far red light AT4G00050
GO:0009704
ISO
PLAZA Integrative Orthologyde-etiolation AT4G00050
GO:0009959
ISO
PLAZA Integrative Orthologynegative gravitropism AT4G00050
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT4G00050
GO:0009416
ISO
PLAZA Integrative Orthologyresponse to light stimulus AT4G00050
GO:0009637
ISO
PLAZA Integrative Orthologyresponse to blue light AT4G00050
GO:0009567
ISO
PLAZA Integrative Orthologydouble fertilization forming a zygote and endosperm AT4G00050
GO:0006351
ISO
PLAZA Integrative Orthologytranscription, DNA-templated AT4G00050
GO:0010187
ISO
PLAZA Integrative Orthologynegative regulation of seed germination AT4G00050
GO:0006355
IC
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT4G00050
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT5G61270
GO:0003690
ISO
PLAZA Integrative Orthologydouble-stranded DNA binding AT5G61270
GO:0046983
IEA
GOA Databaseprotein dimerization activity
GO:0046983
IEA
InterProprotein dimerization activity
GO:0003677
IEA
GOA DatabaseDNA binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT4G00050
GO:0005634
IC, IEA
GOA Databasenucleus
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT5G61270

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036638 Helix-loop-helix DNA-binding domain superfamily
IPR031066 Basic helix-loop-helix (bHLH) transcription factors ALC-like, plant
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
Mapman id Description
15.5.30 RNA biosynthesis.transcriptional regulation.transcription factor (bHLH)