Gene: Os06g0680500

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0680500
  • Transcript Identifier Os06t0680500-01
  • Gene Type Coding gene
  • Location chr06 : 28345632-28350511 : positive

Gene Family Information

  • ID HOM05D000109
  • #Genes/#Species 3058/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0680500-01
  • MSU-ID LOC_Os06g46670.3
  • MSU-ID LOC_Os06g46670.2
  • uniprot Q0DA37

Descriptions

  • Description Similar to Glutamate receptor 3.4 precursor (Ligand-gated ion channel 3.4) (AtGLR4). Splice isoform 2.
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070417
ISO
PLAZA Integrative Orthologycellular response to cold AT1G05200
GO:0019722
ISO
PLAZA Integrative Orthologycalcium-mediated signaling AT1G05200
GO:0071215
ISO
PLAZA Integrative Orthologycellular response to abscisic acid stimulus AT1G05200
GO:0006816
ISO
PLAZA Integrative Orthologycalcium ion transport AT1G05200
GO:0071311
ISO
PLAZA Integrative Orthologycellular response to acetate AT1G05200
GO:0070584
ISO
PLAZA Integrative Orthologymitochondrion morphogenesis AT2G32390
GO:0071260
ISO
PLAZA Integrative Orthologycellular response to mechanical stimulus AT1G05200
GO:0071230
ISO
PLAZA Integrative Orthologycellular response to amino acid stimulus AT1G05200
GO:0034220
IEA
GOA Databaseion transmembrane transport
GO:0009845
ISO
PLAZA Integrative Orthologyseed germination AT2G32390
GO:0009611
ISO
PLAZA Integrative Orthologyresponse to wounding AT1G05200
GO:0006811
IEA
GOA Databaseion transport

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G32400
GO:0005216
ISO
PLAZA Integrative Orthologyion channel activity AT2G32390
GO:0005262
ISO
PLAZA Integrative Orthologycalcium channel activity AT1G05200
GO:0008066
ISO
PLAZA Integrative Orthologyglutamate receptor activity Solyc07g052400.3
GO:0015276
IBA
IEA
GOA Databaseligand-gated ion channel activity
GO:0015276
IEA
InterProligand-gated ion channel activity
GO:0038023
IBA
GOA Databasesignaling receptor activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009536
ISO
PLAZA Integrative Orthologyplastid AT1G05200
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT2G32390
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G32400
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G32390
GO:0016020
IEA
GOA Databasemembrane
GO:0016020
IEA
InterPromembrane
GO:0005886
IBA
GOA Databaseplasma membrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001638 Solute-binding protein family 3/N-terminal domain of MltF
IPR001828 Receptor, ligand binding region
IPR028082 Periplasmic binding protein-like I
IPR001320 Ionotropic glutamate receptor
IPR017103 Ionotropic glutamate receptor, plant
IPR044440 Plant glutamate receptor, periplasmic ligand-binding domain
Mapman id Description
24.3.9 Solute transport.channels.ligand-gated cation channel (GLR)