Gene: Os06g0143000

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os06g0143000
  • Transcript Identifier Os06t0143000-01
  • Gene Type Coding gene
  • Location chr06 : 2256916-2259233 : positive

Gene Family Information

  • ID HOM05D002348
  • #Genes/#Species 289/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os06t0143000-01
  • MSU-ID LOC_Os06g05110.1
  • MSU-ID LOC_Os06g05110.3
  • uniprot Q5VSB7

Descriptions

  • Description Iron-superoxide dismutase (EC 1.15.1.1).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006979
ISO
PLAZA Integrative Orthologyresponse to oxidative stress AT4G25100
GO:0007623
ISO
PLAZA Integrative Orthologycircadian rhythm AT4G25100
GO:0009642
ISO
PLAZA Integrative Orthologyresponse to light intensity AT4G25100
GO:0046686
ISO
PLAZA Integrative Orthologyresponse to cadmium ion AT4G25100
GO:0046688
ISO
PLAZA Integrative Orthologyresponse to copper ion AT4G25100
GO:0010193
ISO
PLAZA Integrative Orthologyresponse to ozone AT4G25100
GO:0019430
IEA
GOA Databaseremoval of superoxide radicals
GO:0006801
IEA
GOA Databasesuperoxide metabolic process
GO:0006801
IEA
InterProsuperoxide metabolic process

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G23310
GO:0019904
ISO
PLAZA Integrative Orthologyprotein domain specific binding AT4G25100
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0046872
IEA
InterPrometal ion binding
GO:0004784
IDA
IEA
GOA Databasesuperoxide dismutase activity
GO:0004784
IEA
InterProsuperoxide dismutase activity
GO:0016491
IEA
GOA Databaseoxidoreductase activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0042646
ISO
PLAZA Integrative Orthologyplastid nucleoid AT5G23310
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT4G25100
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT4G25100
GO:0009579
ISO
PLAZA Integrative Orthologythylakoid AT4G25100
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT4G25100
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT4G25100
GO:0009570
ISO
PLAZA Integrative Orthologychloroplast stroma AT4G25100
GO:0042644
IBA
GOA Databasechloroplast nucleoid
GO:0009536
IEA
GOA Databaseplastid
GO:0009507
IEA
GOA Databasechloroplast

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR019831 Manganese/iron superoxide dismutase, N-terminal
IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily
IPR001189 Manganese/iron superoxide dismutase
IPR019832 Manganese/iron superoxide dismutase, C-terminal
IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily
Mapman id Description
10.2.1.1 Redox homeostasis.enzymatic reactive oxygen scavenging.superoxide dismutase activities.iron superoxide dismutase (FSD)
15.6.1.2.2.4 RNA biosynthesis.organelle machinery.RNA polymerase activities.plastid-encoded RNA polymerase (PEP) complex.essential co-factor components.component PAP4/FSD3