Gene: Os05g0548200

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os05g0548200
  • Transcript Identifier Os05t0548200-01
  • Gene Type Coding gene
  • Location chr05 : 27201536-27202486 : negative

Gene Family Information

  • ID HOM05D001573
  • #Genes/#Species 406/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os05t0548200-01
  • MSU-ID LOC_Os05g47480.1
  • uniprot Q5KQD1

Descriptions

  • Description Similar to Transcription initiation factor IIB (General transcription factor TFIIB).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0070897
IEA
GOA Databasetranscription preinitiation complex assembly
GO:0070897
IEA
InterProtranscription preinitiation complex assembly
GO:0006352
IBA
IEA
GOA DatabaseDNA-templated transcription, initiation
GO:0006352
IEA
InterProDNA-templated transcription, initiation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0017025
IBA
IEA
GOA DatabaseTBP-class protein binding
GO:0017025
IEA
InterProTBP-class protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus
GO:0097550
IBA
GOA Databasetranscription preinitiation complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036915 Cyclin-like superfamily
IPR000812 Transcription factor TFIIB
IPR013763 Cyclin-like
IPR013137 Zinc finger, TFIIB-type
IPR013150 Transcription factor TFIIB, cyclin-like domain
Mapman id Description
35.1 not assigned.annotated