Gene: Os04g0398600
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os04g0398600
- Transcript Identifier Os04t0398600-02
- Gene Type Coding gene
- Location chr04 : 19690799-19693107 : positive
Gene Family Information
- ID HOM05D000001
- #Genes/#Species 35287/100
- Phylogenetic origin
- ID ORTHO05D001247
- #Genes/#Species 448/98
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os04t0398600-02
- MSU-ID LOC_Os04g32670.1
- uniprot Q7XLG3
Descriptions
- Description Similar to Pectin-glucuronyltransferase.
- Description Similar to H0209H04.3 protein.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0010417 | IBA | GOA Database | glucuronoxylan biosynthetic process | |
| GO:0042546 | ISO | PLAZA Integrative Orthology | cell wall biogenesis | AT5G61840 |
| GO:0045492 | ISO | PLAZA Integrative Orthology | xylan biosynthetic process | AT5G61840 |
| GO:0006486 | IEA | GOA Database | protein glycosylation | |
| GO:0006486 | IEA | InterPro | protein glycosylation | |
| GO:0009834 | IBA | GOA Database | plant-type secondary cell wall biogenesis | |
| GO:0071555 | IEA | GOA Database | cell wall organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0047517 | ISO | PLAZA Integrative Orthology | 1,4-beta-D-xylan synthase activity | AT5G61840 |
| GO:0080116 | ISO | PLAZA Integrative Orthology | glucuronoxylan glucuronosyltransferase activity | AT5G61840 |
| GO:0005515 | ISO | PLAZA Homology (enrichment) | protein binding | HOM05D000001 |
| GO:0016757 | IEA | GOA Database | glycosyltransferase activity | |
| GO:0016757 | IEA | InterPro | glycosyltransferase activity | |
| GO:0016740 | IEA | GOA Database | transferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005768 | ISO | PLAZA Integrative Orthology | endosome | AT5G61840 |
| GO:0005802 | ISO | PLAZA Integrative Orthology | trans-Golgi network | AT5G61840 |
| GO:0000139 | IEA | GOA Database | Golgi membrane | |
| GO:0016020 | IEA | GOA Database | membrane | |
| GO:0016021 | IEA | GOA Database | integral component of membrane | |
| GO:0005794 | IEA | GOA Database | Golgi apparatus |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| Mapman id | Description |
|---|---|
| 21.2.2.1.3.2 | Cell wall organisation.hemicellulose.xylan.biosynthesis.xylosyltransferase activities.xylosyltransferase (IRX10) |