Gene: Os03g0165400
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os03g0165400
- Transcript Identifier Os03t0165400-01
- Gene Type Coding gene
- Location chr03 : 3525578-3531031 : negative
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Os03t0165400-01
- MSU-ID LOC_Os03g06940.1
- MSU-ID LOC_Os03g06940.2
- uniprot Q10RB4
Descriptions
- Description Similar to Relative to SR12 protein (Fragment).
- Description Similar to Beta-galactosidase.
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008152 | IEA | GOA Database | metabolic process | |
| GO:0005975 | IEA | GOA Database | carbohydrate metabolic process | |
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004565 | IBA IEA | GOA Database | beta-galactosidase activity | |
| GO:0016798 | IEA | GOA Database | hydrolase activity, acting on glycosyl bonds | |
| GO:0016787 | IEA | GOA Database | hydrolase activity | |
| GO:0004553 | IEA | GOA Database | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds | |
| GO:0030246 | IEA | GOA Database | carbohydrate binding | |
| GO:0030246 | IEA | InterPro | carbohydrate binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0048046 | IEA | GOA Database | apoplast | |
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005618 | IBA | GOA Database | cell wall | |
| GO:0005773 | IBA | GOA Database | vacuole | |
| GO:0009505 | ISO | PLAZA Integrative Orthology | plant-type cell wall | AT1G45130 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |