Gene: Os02g0674800

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0674800
  • Transcript Identifier Os02t0674800-01
  • Gene Type Coding gene
  • Location chr02 : 27488432-27494459 : negative

Gene Family Information

  • ID HOM05D000226
  • #Genes/#Species 1818/96
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0674800-01
  • MSU-ID LOC_Os02g45250.1
  • symbol Roc5
  • name Rice outermost cell-specific gene5
  • uniprot Q6EPF0

Descriptions

  • Description Homeodomain leucine zipper class IV transcriptional factor , Ortholog of Arabidopsis GLABRA2, Modulation of leaf rolling
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0048765
ISO
PLAZA Integrative Orthologyroot hair cell differentiation AT4G00730
GO:0031047
ISO
PLAZA Integrative Orthologygene silencing by RNA AT4G25530
GO:0048497
ISO
PLAZA Integrative Orthologymaintenance of floral organ identity AT3G61150
GO:0043481
ISO
PLAZA Integrative Orthologyanthocyanin accumulation in tissues in response to UV light AT4G00730
GO:0009909
ISO
PLAZA Integrative Orthologyregulation of flower development AT4G25530
GO:0006723
ISO
PLAZA Integrative Orthologycuticle hydrocarbon biosynthetic process AT4G00730
GO:0006349
ISO
PLAZA Integrative Orthologyregulation of gene expression by genetic imprinting AT4G25530
GO:0009827
ISO
PLAZA Integrative Orthologyplant-type cell wall modification AT4G00730
GO:0048364
ISO
PLAZA Integrative Orthologyroot development AT4G00730
GO:0009911
ISO
PLAZA Integrative Orthologypositive regulation of flower development AT4G25530
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT5G07260
GO:0043565
ISO
PLAZA Integrative Orthologysequence-specific DNA binding AT5G52170
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT3G61150
GO:0042803
ISO
PLAZA Integrative Orthologyprotein homodimerization activity AT4G25530
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0008289
IEA
GOA Databaselipid binding
GO:0008289
IEA
InterProlipid binding
GO:0000981
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR002913 START domain
IPR001356 Homeobox domain
IPR023393 START-like domain superfamily
IPR009057 Homeobox-like domain superfamily
IPR042160 Homeobox-leucine zipper protein GLABRA2/ANL2/PDF2/ATML1-like
Mapman id Description
15.5.3.3 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP IV)