Gene: Os02g0159900

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os02g0159900
  • Transcript Identifier Os02t0159900-01
  • Gene Type Coding gene
  • Location chr02 : 3234380-3237521 : positive

Gene Family Information

  • ID HOM05D000147
  • #Genes/#Species 2513/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os02t0159900-01
  • MSU-ID LOC_Os02g06490.1
  • uniprot Q6ETH5

Descriptions

  • Description SKD1 protein (Vacuolar sorting protein 4b).
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0010091
ISO
PLAZA Integrative Orthologytrichome branching AT2G27600
GO:0055078
ISO
PLAZA Integrative Orthologysodium ion homeostasis AT2G27600
GO:0055075
ISO
PLAZA Integrative Orthologypotassium ion homeostasis AT2G27600
GO:0007032
ISO
PLAZA Integrative Orthologyendosome organization AT2G27600
GO:0016192
ISO
PLAZA Integrative Orthologyvesicle-mediated transport AT2G27600
GO:0016197
IBA
GOA Databaseendosomal transport
GO:0007033
IBA
GOA Databasevacuole organization

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G27600
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0000166
IEA
GOA Databasenucleotide binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005771
ISO
PLAZA Integrative Orthologymultivesicular body AT2G27600
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT2G27600
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT2G27600
GO:0016020
IEA
GOA Databasemembrane
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036181 MIT domain superfamily
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR015415 Vps4 oligomerisation, C-terminal
IPR003593 AAA+ ATPase domain
IPR007330 MIT domain
IPR003959 ATPase, AAA-type, core
Mapman id Description
22.4.1.4.1 Vesicle trafficking.endocytic trafficking.ESCRT-mediated sorting.VPS4-VTA1 ESCRT-disassembly complex.ATPase component VPS4/SKD1