Gene: Os01g0940000
General Information
Structural Information
- Species Oryza sativa ssp. japonica
- Gene Identifier Os01g0940000
- Transcript Identifier Os01t0940000-01
- Gene Type Coding gene
- Location chr01 : 41300429-41302472 : positive
Gene Family Information
- ID HOM05D000597
- #Genes/#Species 940/95
- Phylogenetic origin
- ID ORTHO05D000603
- #Genes/#Species 748/95
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Os01t0940000-01
- MSU-ID LOC_Os01g71310.1
- symbol OsSCRM
- symbol SCRM2
- symbol OsSCRM2
- symbol ckx4
- symbol CKX4
- symbol OsCKX4
- symbol SCRM
- name cytokinin oxidase 4
- name Putative cytokinin dehydrogenase 4
- uniprot Q5JLP4
Descriptions
- Description Cytokinin oxidase/dehydrogenase, Crown root formation
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009690 | IEA | GOA Database | cytokinin metabolic process | |
| GO:0009690 | IEA | InterPro | cytokinin metabolic process | |
| GO:0010103 | ISO | PLAZA Integrative Orthology | stomatal complex morphogenesis | AT3G63440 |
| GO:0048507 | ISO | PLAZA Integrative Orthology | meristem development | AT2G41510 |
| GO:0009823 | ISO | PLAZA Integrative Orthology | cytokinin catabolic process | AT2G41510 |
| GO:0009735 | ISO | PLAZA Integrative Orthology | response to cytokinin | Solyc01g088160.4 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003824 | IEA | GOA Database | catalytic activity | |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0016491 | IBA IEA | GOA Database | oxidoreductase activity | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0050660 | IEA | GOA Database | flavin adenine dinucleotide binding | |
| GO:0050660 | IEA | InterPro | flavin adenine dinucleotide binding | |
| GO:0019139 | IC, IEA | GOA Database | cytokinin dehydrogenase activity | |
| GO:0019139 | IEA | InterPro | cytokinin dehydrogenase activity | |
| GO:0071949 | IEA | GOA Database | FAD binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G41510 |
| GO:0005576 | IEA | GOA Database | extracellular region | |
| GO:0005615 | IEA | GOA Database | extracellular space |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR016167 | FAD-binding, type PCMH, subdomain 1 |
| IPR015345 | Cytokinin dehydrogenase 1, FAD/cytokinin binding domain |
| IPR006094 | FAD linked oxidase, N-terminal |
| IPR036318 | FAD-binding, type PCMH-like superfamily |
| IPR016170 | Cytokinin dehydrogenase, C-terminal domain superfamily |
| IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| IPR016164 | FAD-linked oxidase-like, C-terminal |
| Mapman id | Description |
|---|---|
| 11.4.3.2 | Phytohormone action.cytokinin.conjugation and degradation.cytokinin dehydrogenase |