Gene: Os01g0643600

General Information

Structural Information

  • Species Oryza sativa ssp. japonica
  • Gene Identifier Os01g0643600
  • Transcript Identifier Os01t0643600-01
  • Gene Type Coding gene
  • Location chr01 : 25880600-25883649 : negative

Gene Family Information

  • ID HOM05D000393
  • #Genes/#Species 1261/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Os01t0643600-01
  • MSU-ID LOC_Os01g45570.1
  • symbol OsHOX3
  • symbol SGD2
  • symbol SGD2/OsHOX3
  • name Small Grain and Dwarf 2
  • uniprot Q0JKX1

Descriptions

  • Description HD-Zip II family transcription factor, Regulation of plant development, Modulation of gibberellin biosynthesis
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006357
IEA
GOA Databaseregulation of transcription by RNA polymerase II
GO:0006355
IEA
GOA Databaseregulation of transcription, DNA-templated
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT2G01430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0043565
IEA
GOA Databasesequence-specific DNA binding
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0000981
IEA
GOA DatabaseDNA-binding transcription factor activity, RNA polymerase II-specific
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G70920
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G70920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003106 Leucine zipper, homeobox-associated
IPR001356 Homeobox domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.3.1 RNA biosynthesis.transcriptional regulation.Homeobox transcription factor superfamily.transcription factor (HD-ZIP I/II)