Gene: Nitab4.5_0011052g0030

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0011052g0030
  • Transcript Identifier Nitab4.5_0011052g0030.1
  • Gene Type Coding gene
  • Location Nitab4.5_0011052 : 53268-55499 : negative

Gene Family Information

  • ID HOM05D000001
  • #Genes/#Species 35287/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0011052g0030.1
  • SR1-identifier Nta11g17200.1

Descriptions

  • Description Pentatricopeptide repeat, Tetratricopeptide-like helical
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009451
ISO
PLAZA Integrative OrthologyRNA modification AT5G48910
GO:0080156
ISO
PLAZA Integrative Orthologymitochondrial mRNA modification AT3G05240
GO:0031425
ISO
PLAZA Integrative Orthologychloroplast RNA processing AT2G29760

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G29760

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT2G29760
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT3G05240

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
IPR032867 DYW domain
Mapman id Description
16.11.3.3.4.48 RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (OTP81)