Gene: Nitab4.5_0009224g0020

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0009224g0020
  • Transcript Identifier Nitab4.5_0009224g0020.1
  • Gene Type Coding gene
  • Location Nitab4.5_0009224 : 6210-9139 : positive

Gene Family Information

  • ID HOM05D001480
  • #Genes/#Species 429/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0009224g0020.1
  • SR1-identifier Nta02g13320.1

Descriptions

  • Description RNA recognition motif domain, RNA-binding protein Lupus La, Winged helix-turn-helix DNA-binding domain, Ataxin-2, C-terminal, Nucleotide-binding, alpha-beta plait
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006396
ISO
PLAZA Homology (enrichment)RNA processing HOM05D001480

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0003723
ISO
PLAZA Homology (enrichment)RNA binding HOM05D001480

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Homology (enrichment)nucleus HOM05D001480
GO:1990904
ISO
PLAZA Homology (enrichment)ribonucleoprotein complex HOM05D001480

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR000504 RNA recognition motif domain
IPR006630 La-type HTH domain
IPR009818 Ataxin-2, C-terminal
IPR035979 RNA-binding domain superfamily
IPR036388 Winged helix-like DNA-binding domain superfamily
IPR036390 Winged helix DNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated