Gene: Nitab4.5_0008279g0020

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0008279g0020
  • Transcript Identifier Nitab4.5_0008279g0020.1
  • Gene Type Coding gene
  • Location Nitab4.5_0008279 : 6902-15137 : positive

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0008279g0020.1
  • SR1-identifier Nta01g09570.1

Descriptions

  • Description RNA helicase, DEAD-box type, Q motif, Helicase, superfamily 1/2, ATP-binding domain, P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, DNA/RNA helicase, DEAD/DEAH box type, N-terminal
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold AT5G08620
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc01g095740.4
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT5G08620
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT5G08620

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003723
ISO
PLAZA Integrative OrthologyRNA binding AT5G08620
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc01g095740.4
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G08610

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT5G08610

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated