Gene: Nitab4.5_0005885g0010

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0005885g0010
  • Transcript Identifier Nitab4.5_0005885g0010.1
  • Gene Type Coding gene
  • Location Nitab4.5_0005885 : 94445-101329 : negative

Gene Family Information

  • ID HOM05D002682
  • #Genes/#Species 256/93
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0005885g0010.1
  • SR1-identifier Nta19g17040.1

Descriptions

  • Description Zinc finger, CCHC-type, RNA recognition motif domain, Nucleotide-binding, alpha-beta plait
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000398
ISO
PLAZA Integrative OrthologymRNA splicing, via spliceosome AT1G23860

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0042802
ISO
PLAZA Integrative Orthologyidentical protein binding AT1G23860
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT1G23860
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G23860

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT1G23860
GO:0016607
ISO
PLAZA Integrative Orthologynuclear speck AT1G23860

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR001878 Zinc finger, CCHC-type
IPR035979 RNA-binding domain superfamily
IPR036875 Zinc finger, CCHC-type superfamily
Mapman id Description
16.2.6.4 RNA processing.pre-mRNA splicing.spliceosome-associated non-snRNP factor activities.splicing factor (RSZ21/22)