Gene: Nitab4.5_0005842g0040

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0005842g0040
  • Transcript Identifier Nitab4.5_0005842g0040.1
  • Gene Type Coding gene
  • Location Nitab4.5_0005842 : 73907-79650 : negative

Gene Family Information

  • ID HOM05D000032
  • #Genes/#Species 5307/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0005842g0040.1
  • SR1-identifier Nta05g21330.1

Descriptions

  • Description P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, RNA helicase, ATP-dependent, DEAD-box, conserved site, RNA helicase, DEAD-box type, Q motif, Helicase, superfamily 1/2, ATP-binding domain
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016070
ISO
PLAZA Integrative OrthologyRNA metabolic process Solyc03g112350.4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
InterProATP binding
GO:0003724
ISO
PLAZA Integrative OrthologyRNA helicase activity Solyc03g112350.4
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT5G63120

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR001650 Helicase, C-terminal
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
16.2.1.1.4 RNA processing.pre-mRNA splicing.U2-type-intron-specific major spliceosome.U1 small nuclear ribonucleoprotein particle (snRNP).pre-mRNA splicing regulator (DDX5)