Gene: Nitab4.5_0004376g0130
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0004376g0130
- Transcript Identifier Nitab4.5_0004376g0130.1
- Gene Type Coding gene
- Location Nitab4.5_0004376 : 192718-194141 : positive
Gene Family Information
- ID HOM05D000540
- #Genes/#Species 1013/99
- Phylogenetic origin
- ID ORTHO05D000681
- #Genes/#Species 683/95
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Nitab4.5_0004376g0130.1
- SR1-identifier Nta06g13620.1
Descriptions
- Description Ribosomal protein L2, domain 3, Nucleic acid-binding, OB-fold, Ribosomal Proteins L2, RNA binding domain, Ribosomal protein L2 domain 2, Ribosomal protein L2, C-terminal, Ribosomal protein L2, bacterial/organellar-type, Translation protein SH3-like domain, Ribosomal protein L2
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006412 | IEA | InterPro | translation |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003735 | IEA | InterPro | structural constituent of ribosome | |
| GO:0003723 | IEA | InterPro | RNA binding | |
| GO:0016740 | IEA | InterPro | transferase activity | |
| GO:0003729 | ISO | PLAZA Integrative Orthology | mRNA binding | ATCG00830 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005840 | IEA | InterPro | ribosome | |
| GO:0015934 | IEA | InterPro | large ribosomal subunit | |
| GO:0009570 | ISO | PLAZA Integrative Orthology | chloroplast stroma | ATCG01310 |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | ATCG01310 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | ATCG01310 |
| GO:0000311 | ISO | PLAZA Integrative Orthology | plastid large ribosomal subunit | ATCG00830 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR014726 | Ribosomal protein L2, domain 3 |
| IPR002171 | Ribosomal protein L2 |
| IPR008991 | Translation protein SH3-like domain superfamily |
| IPR005880 | Ribosomal protein L2, bacterial/organellar-type |
| IPR022666 | Ribosomal Proteins L2, RNA binding domain |
| IPR022669 | Ribosomal protein L2, C-terminal |
| IPR012340 | Nucleic acid-binding, OB-fold |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |