Gene: Nitab4.5_0004347g0020
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0004347g0020
- Transcript Identifier Nitab4.5_0004347g0020.1
- Gene Type Coding gene
- Location Nitab4.5_0004347 : 3686-21257 : negative
Gene Family Information
- ID HOM05D000140
- #Genes/#Species 2610/97
- Phylogenetic origin
- ID ORTHO05D000087
- #Genes/#Species 2327/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0004347g0020.1
- SR1-identifier Nta03g27080.3
Descriptions
- Description Galactose-binding domain-like, Glycoside hydrolase, superfamily, Glycoside hydrolase, family 35, D-galactoside/L-rhamnose binding SUEL lectin domain, Glycoside hydrolase, catalytic domain, Glycoside hydrolase, family 35, conserved site
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005975 | IEA | InterPro | carbohydrate metabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0030246 | IEA | InterPro | carbohydrate binding | |
| GO:0004553 | IEA | InterPro | hydrolase activity, hydrolyzing O-glycosyl compounds |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005774 | ISO | PLAZA Integrative Orthology | vacuolar membrane | AT2G32810 |
| GO:0005773 | ISO | PLAZA Integrative Orthology | vacuole | AT2G32810 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain |
| IPR041392 | Beta-galactosidase, beta-sandwich domain |
| IPR017853 | Glycoside hydrolase superfamily |
| IPR031330 | Glycoside hydrolase 35, catalytic domain |
| IPR001944 | Glycoside hydrolase, family 35 |
| IPR008979 | Galactose-binding-like domain superfamily |
| IPR043159 | D-galactoside/L-rhamnose binding SUEL lectin domain superfamily |
| Mapman id | Description |
|---|---|
| 21.3.2.2.3 | Cell wall organisation.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase (BGAL) |