Gene: Nitab4.5_0003894g0040
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0003894g0040
- Transcript Identifier Nitab4.5_0003894g0040.1
- Gene Type Coding gene
- Location Nitab4.5_0003894 : 42821-54817 : negative
Gene Family Information
- ID HOM05D001444
- #Genes/#Species 436/100
- Phylogenetic origin
- ID ORTHO05D003766
- #Genes/#Species 206/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- tid Nitab4.5_0003894g0040.1
- SR1-identifier Nta23g10400.1
Descriptions
- Description P-loop containing nucleoside triphosphate hydrolase, Ribosomal protein S5 domain 2-type fold, Lon protease, AAA ATPase domain, Peptidase S16, Lon C-terminal, Peptidase S16, active site, Lon protease, bacterial/eukaryotic-type, Ribosomal protein S5 domain 2-type fold, subgroup, ATPase, AAA-type, core
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006508 | IEA | InterPro | proteolysis | |
| GO:0030163 | IEA | InterPro | protein catabolic process |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004176 | IEA | InterPro | ATP-dependent peptidase activity | |
| GO:0004252 | IEA | InterPro | serine-type endopeptidase activity | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0016887 | IEA | InterPro | ATP hydrolysis activity | |
| GO:0005515 | ISO | PLAZA Integrative Orthology | protein binding | AT5G26860 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G26860 |
| GO:0005739 | ISO | PLAZA Integrative Orthology | mitochondrion | AT5G26860 |
| GO:0005829 | ISO | PLAZA Integrative Orthology | cytosol | AT5G26860 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR008269 | Peptidase S16, Lon proteolytic domain |
| IPR003593 | AAA+ ATPase domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR020568 | Ribosomal protein S5 domain 2-type fold |
| IPR004815 | Lon protease, bacterial/eukaryotic-type |
| IPR003959 | ATPase, AAA-type, core |
| IPR027065 | Lon protease |
| IPR014721 | Ribosomal protein S5 domain 2-type fold, subgroup |
| Mapman id | Description |
|---|---|
| 19.4.2.4 | Protein homeostasis.proteolysis.serine-type peptidase activities.S16-class protease (LON) |