Gene: Nitab4.5_0003680g0090

General Information

Structural Information

Species Nicotiana tabacum
Gene Identifier Nitab4.5_0003680g0090
Transcript Identifier Nitab4.5_0003680g0090.1
Gene Type Coding gene
Location Nitab4.5_0003680 : 155106-156650 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000001
#Genes/#Species 35287/100
Phylogenetic origin

ID ORTHO05D000003
#Genes/#Species 15137/100
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Nitab4.5_0003680g0090.1
SR1-identifier Nta05g20330.1

Descriptions

Short descriptions
Ortholog descriptions

Description Pentatricopeptide repeat, Tetratricopeptide-like helical

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:1900865	ISO	PLAZA Integrative Orthology	chloroplast RNA modification	AT5G59200
GO:0031425	ISO	PLAZA Integrative Orthology	chloroplast RNA processing	AT5G59200

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005515	IEA	InterPro	protein binding
GO:0008270	IEA	InterPro	zinc ion binding

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	AT5G59200

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR011990	Tetratricopeptide-like helical domain superfamily
IPR002885	Pentatricopeptide repeat
IPR032867	DYW domain

Mapman id	Description
16.11.3.3.4.47	RNA processing.organelle machinery.RNA modification.C-to-U RNA editing.PPR-type RNA editing factor activities.RNA editing factor (ELI1)