Gene: Nitab4.5_0001130g0050
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0001130g0050
- Transcript Identifier Nitab4.5_0001130g0050.1
- Gene Type Coding gene
- Location Nitab4.5_0001130 : 112264-123525 : positive
Gene Family Information
- ID HOM05D000526
- #Genes/#Species 1037/100
- Phylogenetic origin
- ID ORTHO05D004081
- #Genes/#Species 192/96
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0001130g0050.1
- SR1-identifier Nta05g11040.1
Descriptions
- Description WD40/YVTN repeat-like-containing domain, WD40 repeat, conserved site, WD40-repeat-containing domain, AIG1, WD40 repeat, Chloroplast protein import component Toc34, P-loop containing nucleoside triphosphate hydrolase
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006886 | IEA | InterPro | intracellular protein transport | |
| GO:0019750 | ISO | PLAZA Integrative Orthology | chloroplast localization | AT5G05000 |
| GO:1904668 | ISO | PLAZA Homology (enrichment) | positive regulation of ubiquitin protein ligase activity | HOM05D000526 |
| GO:0045036 | ISO | PLAZA Integrative Orthology | protein targeting to chloroplast | AT5G05000 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0015450 | IEA | InterPro | protein-transporting ATPase activity | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0042802 | ISO | PLAZA Integrative Orthology | identical protein binding | AT5G05000 |
| GO:0097027 | ISO | PLAZA Homology (enrichment) | ubiquitin-protein transferase activator activity | HOM05D000526 |
| GO:0003924 | ISO | PLAZA Integrative Orthology | GTPase activity | AT5G05000 |
| GO:0010997 | ISO | PLAZA Homology (enrichment) | anaphase-promoting complex binding | HOM05D000526 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009707 | IEA | InterPro | chloroplast outer membrane | |
| GO:0009507 | ISO | PLAZA Integrative Orthology | chloroplast | AT5G05000 |
| GO:0009941 | ISO | PLAZA Integrative Orthology | chloroplast envelope | AT5G05000 |
| GO:0009536 | ISO | PLAZA Integrative Orthology | plastid | AT5G05000 |
| GO:0005622 | ISO | PLAZA Integrative Orthology | intracellular anatomical structure | AT5G05000 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR024977 | Anaphase-promoting complex subunit 4, WD40 domain |
| IPR045058 | GTPase GIMA/IAN/Toc |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR005688 | Chloroplast protein import component Toc34 |
| IPR006703 | AIG1-type guanine nucleotide-binding (G) domain |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR001680 | WD40 repeat |
| Mapman id | Description |
|---|---|
| 23.1.2.3 | Protein translocation.chloroplast.outer envelope TOC translocation system.receptor GTPase (Toc33/Toc34) |