Gene: Nitab4.5_0000847g0070

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000847g0070
  • Transcript Identifier Nitab4.5_0000847g0070.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000847 : 728645-730300 : negative

Gene Family Information

  • ID HOM05D002167
  • #Genes/#Species 309/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000847g0070.1
  • SR1-identifier Nta08g12200.1

Descriptions

  • Description Ribosomal protein S5 domain 2-type fold, subgroup, Ribosomal protein S5, C-terminal, Ribosomal protein S5, Ribosomal protein S5, eukaryotic/archaeal, Ribosomal protein S5, N-terminal, Ribosomal protein S5, N-terminal, conserved site, Ribosomal protein S5 domain 2-type fold, Double-stranded RNA-binding domain
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006412
IEA
InterProtranslation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003735
IEA
InterProstructural constituent of ribosome
GO:0003723
IEA
InterProRNA binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G41840
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT1G58684

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005840
IEA
InterProribosome
GO:0015935
IEA
InterProsmall ribosomal subunit
GO:0009506
ISO
PLAZA Integrative Orthologyplasmodesma AT1G58380
GO:0022626
ISO
PLAZA Integrative Orthologycytosolic ribosome AT2G41840
GO:0022627
ISO
PLAZA Integrative Orthologycytosolic small ribosomal subunit AT1G58380
GO:0005618
ISO
PLAZA Integrative Orthologycell wall AT1G58983
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT2G41840
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT2G41840
GO:0005886
ISO
PLAZA Integrative Orthologyplasma membrane AT1G58380
GO:0042788
ISO
PLAZA Integrative Orthologypolysomal ribosome AT2G41840

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000851 Ribosomal protein S5
IPR020568 Ribosomal protein S5 domain 2-type fold
IPR005324 Ribosomal protein S5, C-terminal
IPR013810 Ribosomal protein S5, N-terminal
IPR005711 Ribosomal protein S5, eukaryotic/archaeal
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Mapman id Description
17.1.3.1.2 Protein biosynthesis.ribosome biogenesis.small ribosomal subunit (SSU).SSU proteome.component RPS2