Gene: Nitab4.5_0000811g0040

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000811g0040
  • Transcript Identifier Nitab4.5_0000811g0040.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000811 : 60136-62922 : negative

Gene Family Information

  • ID HOM05D000854
  • #Genes/#Species 698/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000811g0040.1
  • SR1-identifier Nta23g14880.1

Descriptions

  • Description Like-Sm (LSM) domain, Ribonucleoprotein LSM domain, eukaryotic/archaea-type, Ribonucleoprotein LSM domain, Small nuclear ribonucleoprotein SmF
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000387
IEA
InterProspliceosomal snRNP assembly
GO:0000398
IEA
InterPromRNA splicing, via spliceosome

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005681
IEA
InterProspliceosomal complex

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001163 LSM domain, eukaryotic/archaea-type
IPR034100 Small nuclear ribonucleoprotein F
IPR010920 LSM domain superfamily
IPR016487 Sm-like protein Lsm6/SmF
Mapman id Description
16.2.2.6 RNA processing.pre-mRNA splicing.U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex.component Sm-F