Gene: Nitab4.5_0000368g0300
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0000368g0300
- Transcript Identifier Nitab4.5_0000368g0300.1
- Gene Type Coding gene
- Location Nitab4.5_0000368 : 735777-741439 : negative
Gene Family Information
- ID HOM05D000246
- #Genes/#Species 1713/100
- Phylogenetic origin
- ID ORTHO05D002923
- #Genes/#Species 254/96
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Nitab4.5_0000368g0300.1
- SR1-identifier Nta02g27310.1
Descriptions
- Description P-loop containing nucleoside triphosphate hydrolase, Helicase, C-terminal, DNA/RNA helicase, DEAD/DEAH box type, N-terminal, DNA helicase, ATP-dependent, RecQ type, DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site, Helicase, superfamily 1/2, ATP-binding domain, Winged helix-turn-helix DNA-binding domain
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006310 | IEA | InterPro | DNA recombination | |
| GO:0016070 | ISO | PLAZA Integrative Orthology | RNA metabolic process | Solyc01g100280.4 |
| GO:0042631 | ISO | PLAZA Integrative Orthology | cellular response to water deprivation | AT3G05740 |
| GO:0070417 | ISO | PLAZA Integrative Orthology | cellular response to cold | AT3G05740 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0004386 | IEA | InterPro | helicase activity | |
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0005524 | IEA | InterPro | ATP binding | |
| GO:0003724 | ISO | PLAZA Integrative Orthology | RNA helicase activity | Solyc01g100280.4 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001650 | Helicase, C-terminal |
| IPR032284 | ATP-dependent DNA helicase RecQ, zinc-binding domain |
| IPR004589 | DNA helicase, ATP-dependent, RecQ type |
| IPR011545 | DEAD/DEAH box helicase domain |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
| IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |