Gene: Nitab4.5_0000136g0060
General Information
Structural Information
- Species Nicotiana tabacum
- Gene Identifier Nitab4.5_0000136g0060
- Transcript Identifier Nitab4.5_0000136g0060.1
- Gene Type Coding gene
- Location Nitab4.5_0000136 : 346748-364167 : positive
Gene Family Information
- ID HOM05D000706
- #Genes/#Species 813/97
- Phylogenetic origin
- ID ORTHO05D001633
- #Genes/#Species 378/96
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Nitab4.5_0000136g0060.1
- SR1-identifier Nta04g07450.1
Descriptions
- Description SWIB/MDM2 domain, GYF, SWIB domain, Plus-3, Zinc finger, FYVE/PHD-type, Plus-3 domain, subgroup, Zinc finger, PHD-type, Zinc finger, PHD-finger, Zinc finger, RING/FYVE/PHD-type
- Loading (ortholog descriptions from ath)...
Functional Annotation
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0003677 | IEA | InterPro | DNA binding |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR003121 | SWIB/MDM2 domain |
| IPR003169 | GYF domain |
| IPR036128 | Plus3-like superfamily |
| IPR036885 | SWIB/MDM2 domain superfamily |
| IPR035445 | GYF-like domain superfamily |
| IPR001965 | Zinc finger, PHD-type |
| IPR011011 | Zinc finger, FYVE/PHD-type |
| IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| IPR004343 | Plus-3 domain |
| IPR019835 | SWIB domain |
| Mapman id | Description |
|---|---|
| 12.5.1.15.1 | Chromatin organisation.DNA methylation.RNA-directed DNA methylation (RdDM) pathway.non-canonical RdDM pathway.protein factor (NERD) |