Gene: Nitab4.5_0000006g0180

General Information

Structural Information

Species Nicotiana tabacum
Gene Identifier Nitab4.5_0000006g0180
Transcript Identifier Nitab4.5_0000006g0180.1
Gene Type Coding gene
Location Nitab4.5_0000006 : 809062-819146 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000515
#Genes/#Species 1048/100
Phylogenetic origin

ID ORTHO05D003530
#Genes/#Species 218/94
Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

tid Nitab4.5_0000006g0180.1
SR1-identifier Nta10g15240.1

Descriptions

Short descriptions
Ortholog descriptions

Description Zinc finger, RING-type, P-loop containing nucleoside triphosphate hydrolase, Helicase, superfamily 1/2, ATP-binding domain, SNF2-related, Zinc finger, RING-type, conserved site, Zinc finger, C3HC4 RING-type, Zinc finger, RING/FYVE/PHD-type

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0016070	ISO	PLAZA Integrative Orthology	RNA metabolic process	Solyc05g044480.3

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005524	IEA	InterPro	ATP binding
GO:0070615	IEA	InterPro	nucleosome-dependent ATPase activity
GO:0003724	ISO	PLAZA Integrative Orthology	RNA helicase activity	Solyc05g044480.3

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR013083	Zinc finger, RING/FYVE/PHD-type
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR038718	SNF2-like, N-terminal domain superfamily
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR027370	RING-type zinc-finger, LisH dimerisation motif
IPR000330	SNF2, N-terminal
IPR001841	Zinc finger, RING-type

Mapman id	Description
12.4.8.3.2	Chromatin organisation.nucleosome remodeling.other chromatin remodeling activities.Rad5/16-like group.chromatin remodeling factor (Rad5-like)