Gene: Medtr3g054400

General Information

Structural Information

Species Medicago truncatula
Gene Identifier Medtr3g054400
Transcript Identifier Medtr3g054400.1
Gene Type Coding gene
Location chr3 : 21589785-21592985 : negative

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05D000113
#Genes/#Species 2932/100
Phylogenetic origin

ID ORTHO05D004634
#Genes/#Species 175/96
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

pacid 31056392
id Medtr3g054400.JCVIMt4.0v1

Descriptions

Short descriptions
Ortholog descriptions

Description pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16

Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0005524	IEA	InterPro	ATP binding
GO:0004386	IEA	InterPro	helicase activity

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR027417	P-loop containing nucleoside triphosphate hydrolase
IPR011545	DEAD/DEAH box helicase domain
IPR001650	Helicase, C-terminal
IPR007502	Helicase-associated domain
IPR014001	Helicase superfamily 1/2, ATP-binding domain
IPR011709	Domain of unknown function DUF1605

Mapman id	Description
16.2.7.1.6	RNA processing.pre-mRNA splicing.spliceosome assembly and disassembly.RNA helicase activities.RNA helicase (Prp16)