Gene: MSTRG.7481
General Information
Structural Information
- Species Avicennia marina
- Gene Identifier MSTRG.7481
- Transcript Identifier MSTRG.7481.1
- Gene Type Coding gene
- Location ScioBoG_102840_HRSCAF_103099 : 15015804-15018872 : negative
Gene Family Information
- ID HOM05D001480
- #Genes/#Species 429/100
- Phylogenetic origin
- ID ORTHO05D001331
- #Genes/#Species 430/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
Descriptions
- tid MSTRG.7481.1
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | ISO | PLAZA Homology (enrichment) | RNA processing | HOM05D001480 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | ISO | PLAZA Homology (enrichment) | nucleus | HOM05D001480 |
| GO:1990904 | ISO | PLAZA Homology (enrichment) | ribonucleoprotein complex | HOM05D001480 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| IPR035979 | RNA-binding domain superfamily |
| IPR006630 | La-type HTH domain |
| IPR034878 | Plant La-related protein, RNA recognition motif |
| IPR000504 | RNA recognition motif domain |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |