Gene: MSTRG.5210

General Information

Structural Information

  • Species Avicennia marina
  • Gene Identifier MSTRG.5210
  • Transcript Identifier MSTRG.5210.2
  • Gene Type Coding gene
  • Location ScioBoG_102838_HRSCAF_103081 : 8081367-8085150 : positive

Gene Family Information

  • ID HOM05D262349
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin
  • ID ORTHO05D467460
  • #Genes/#Species 1 / 1(orphan gene)
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • tid MSTRG.5210.2
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0001522
IEA
InterPropseudouridine synthesis
GO:0009451
IEA
InterProRNA modification

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003723
IEA
InterProRNA binding
GO:0009982
IEA
InterPropseudouridine synthase activity

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001406 Pseudouridine synthase I, TruA
IPR020103 Pseudouridine synthase, catalytic domain superfamily
IPR020094 Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal
IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain
IPR020095 Pseudouridine synthase I, TruA, C-terminal
Mapman id Description
50.5.4 Enzyme classification.EC_5 isomerases.EC_5.4 intramolecular transferase