Gene: MSTRG.12864

General Information

Structural Information

  • Species Avicennia marina
  • Gene Identifier MSTRG.12864
  • Transcript Identifier MSTRG.12864.1
  • Gene Type Coding gene
  • Location ScioBoG_17730_HRSCAF_17811 : 17237477-17239243 : negative

Gene Family Information

  • ID HOM05D001990
  • #Genes/#Species 332/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

Descriptions

  • tid MSTRG.12864.1
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009873
ISO
PLAZA Integrative Orthologyethylene-activated signaling pathway AT3G24500
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT3G24500
GO:0009408
ISO
PLAZA Integrative Orthologyresponse to heat AT3G24500
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT3G24500
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT3G24500

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
InterProDNA binding
GO:0003700
ISO
PLAZA Integrative OrthologyDNA-binding transcription factor activity AT3G24500
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G58680
GO:0003713
ISO
PLAZA Integrative Orthologytranscription coactivator activity AT3G24500
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G58680

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005730
ISO
PLAZA Integrative Orthologynucleolus AT3G24500
GO:0005622
ISO
PLAZA Integrative Orthologyintracellular anatomical structure AT3G24500
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT3G58680
GO:0005737
ISO
PLAZA Integrative Orthologycytoplasm AT3G58680

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001387 Cro/C1-type helix-turn-helix domain
IPR010982 Lambda repressor-like, DNA-binding domain superfamily
IPR013729 Multiprotein bridging factor 1, N-terminal
Mapman id Description
35.1 not assigned.annotated