Gene: Lsat_1_v5_gn_9_110320
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_9_110320
- Transcript Identifier Lsat_1_v5_gn_9_110320.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_9 : 177942825-177945185 : positive
Gene Family Information
- ID HOM05D001480
- #Genes/#Species 429/100
- Phylogenetic origin
- ID ORTHO05D001331
- #Genes/#Species 430/100
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_9_110320.v5
- pacid 38924130
Descriptions
- Description K15191 - La-related protein 7 (LARP7)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006396 | IEA | InterPro | RNA processing |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0003676 | IEA | InterPro | nucleic acid binding | |
| GO:0003723 | IEA | InterPro | RNA binding |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | InterPro | nucleus | |
| GO:1990904 | IEA | InterPro | ribonucleoprotein complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR000504 | RNA recognition motif domain |
| IPR006630 | La-type HTH domain |
| IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| IPR002344 | Lupus La protein |
| IPR035979 | RNA-binding domain superfamily |
| IPR036388 | Winged helix-like DNA-binding domain superfamily |
| IPR036390 | Winged helix DNA-binding domain superfamily |
| Mapman id | Description |
|---|---|
| 35.1 | not assigned.annotated |