Gene: Lsat_1_v5_gn_8_52920
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_8_52920
- Transcript Identifier Lsat_1_v5_gn_8_52920.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_8 : 73523342-73524473 : negative
Gene Family Information
- ID HOM05D001668
- #Genes/#Species 387/98
- Phylogenetic origin
- ID ORTHO05D001693
- #Genes/#Species 369/98
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- id Lsat_1_v5_gn_8_52920.v5
- pacid 38952933
Descriptions
- Description 1.14.13.169 - Transferred entry: 1.14.18.5
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0008610 | IEA | InterPro | lipid biosynthetic process | |
| GO:0009640 | ISO | PLAZA Integrative Orthology | photomorphogenesis | AT1G69640 |
| GO:0046520 | ISO | PLAZA Integrative Orthology | sphingoid biosynthetic process | AT1G69640 |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005506 | IEA | InterPro | iron ion binding | |
| GO:0016491 | IEA | InterPro | oxidoreductase activity | |
| GO:0000170 | ISO | PLAZA Integrative Orthology | sphingosine hydroxylase activity | AT1G69640 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005783 | ISO | PLAZA Integrative Orthology | endoplasmic reticulum | AT1G69640 |
| GO:0005794 | ISO | PLAZA Integrative Orthology | Golgi apparatus | AT1G69640 |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR006694 | Fatty acid hydroxylase |
| Mapman id | Description |
|---|---|
| 5.4.4 | Lipid metabolism.sphingolipid biosynthesis.sphingobase hydroxylase (SBH) |