Gene: Lsat_1_v5_gn_8_5201

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_8_5201
  • Transcript Identifier Lsat_1_v5_gn_8_5201.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_8 : 6344820-6352851 : positive

Gene Family Information

  • ID HOM05D001465
  • #Genes/#Species 432/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_8_5201.v5
  • pacid 38948877

Descriptions

  • Description PTHR12549//PTHR12549:SF12 - JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN // SUBFAMILY NOT NAMED
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0033169
IEA
InterProhistone H3-K9 demethylation
GO:0006457
IEA
InterProprotein folding

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0016887
IEA
InterProATP hydrolysis activity
GO:0032454
IEA
InterProhistone demethylase activity (H3-K9 specific)
GO:0051082
IEA
InterProunfolded protein binding

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005759
ISO
PLAZA Integrative Orthologymitochondrial matrix AT5G53350
GO:0005739
ISO
PLAZA Integrative Orthologymitochondrion AT5G53350

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR003959 ATPase, AAA-type, core
IPR003347 JmjC domain
IPR019489 Clp ATPase, C-terminal
IPR045109 Histone demethylase JHDM2-like
IPR003593 AAA+ ATPase domain
IPR004487 Clp protease, ATP-binding subunit ClpX
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
12.3.3.8.1 Chromatin organisation.post-translational histone modification.histone lysine methylation.JmjC group histone demethylase activities.histone demethylase (KDM3)
19.4.2.8.2 Protein homeostasis.proteolysis.serine-type peptidase activities.mitochondrion Clp-type protease complex.chaperone component ClpX