Gene: Lsat_1_v5_gn_7_47300

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_7_47300
  • Transcript Identifier Lsat_1_v5_gn_7_47300.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_7 : 63552082-63554977 : positive

Gene Family Information

  • ID HOM05D000635
  • #Genes/#Species 893/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_7_47300.v5
  • pacid 38913001

Descriptions

  • Description PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006298
IEA
InterPromismatch repair
GO:0055085
ISO
PLAZA Homology (enrichment)transmembrane transport HOM05D000635
GO:0098656
ISO
PLAZA Homology (enrichment)anion transmembrane transport HOM05D000635

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
InterProATP binding
GO:0030983
IEA
InterPromismatched DNA binding
GO:0008308
ISO
PLAZA Homology (enrichment)voltage-gated anion channel activity HOM05D000635

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005741
ISO
PLAZA Homology (enrichment)mitochondrial outer membrane HOM05D000635

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR023614 Porin domain superfamily
IPR045076 DNA mismatch repair MutS family
IPR000432 DNA mismatch repair protein MutS, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
Mapman id Description
24.4.1 Solute transport.porins.voltage-gated anion channel (VDAC)