Gene: Lsat_1_v5_gn_6_78860
General Information
Structural Information
- Species Lactuca sativa
- Gene Identifier Lsat_1_v5_gn_6_78860
- Transcript Identifier Lsat_1_v5_gn_6_78860.1
- Gene Type Coding gene
- Location Lsat_1_v8_lg_6 : 129665002-129666114 : positive
Gene Family Information
- ID HOM05D000114
- #Genes/#Species 2914/98
- Phylogenetic origin
- ID ORTHO05D000075
- #Genes/#Species 2458/97
- Phylogenetic origin
Gene Duplication Information
- Tandem Duplication Tandem duplicate
Labels
Identifiers
- id Lsat_1_v5_gn_6_78860.v5
- pacid 38941740
Descriptions
- Description PTHR31867:SF2 - EXPANSIN-A18-RELATED
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0009664 | IEA | InterPro | plant-type cell wall organization | |
| GO:0048767 | ISO | PLAZA Integrative Orthology | root hair elongation | AT1G12560 |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005576 | IEA | InterPro | extracellular region |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR002963 | Expansin |
| IPR007112 | Expansin/pollen allergen, DPBB domain |
| IPR007118 | Expansin/Lol pI |
| IPR009009 | RlpA-like protein, double-psi beta-barrel domain |
| IPR036749 | Expansin, cellulose-binding-like domain superfamily |
| IPR007117 | Expansin, cellulose-binding-like domain |
| IPR036908 | RlpA-like domain superfamily |
| Mapman id | Description |
|---|---|
| 21.4.2.1 | Cell wall organisation.cell wall proteins.expansin activities.alpha-class expansin |