Gene: Lsat_1_v5_gn_6_71420

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_71420
  • Transcript Identifier Lsat_1_v5_gn_6_71420.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 116880948-116883006 : negative

Gene Family Information

  • ID HOM05D001779
  • #Genes/#Species 367/97
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_71420.v5
  • pacid 38942161

Descriptions

  • Description PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009793
ISO
PLAZA Integrative Orthologyembryo development ending in seed dormancy AT3G06430
GO:0009555
ISO
PLAZA Integrative Orthologypollen development AT3G06430
GO:0009553
ISO
PLAZA Integrative Orthologyembryo sac development AT3G06430
GO:0048868
ISO
PLAZA Integrative Orthologypollen tube development AT3G06430

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
IEA
InterProprotein binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT3G06430
GO:0019843
ISO
PLAZA Integrative OrthologyrRNA binding AT3G06430

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G06430

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011990 Tetratricopeptide-like helical domain superfamily
IPR002885 Pentatricopeptide repeat
Mapman id Description
35.1 not assigned.annotated