Gene: Lsat_1_v5_gn_6_48240

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_48240
  • Transcript Identifier Lsat_1_v5_gn_6_48240.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 66649888-66653850 : negative

Gene Family Information

  • ID HOM05D000357
  • #Genes/#Species 1335/99
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_48240.v5
  • pacid 38939790

Descriptions

  • Description PF00076//PF01428 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) // AN1-like Zinc finger (zf-AN1)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003676
IEA
InterPronucleic acid binding
GO:0008270
IEA
InterProzinc ion binding
GO:0003677
ISO
PLAZA Homology (enrichment)DNA binding HOM05D000357

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000504 RNA recognition motif domain
IPR035896 AN1-like Zinc finger
IPR000058 Zinc finger, AN1-type
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 RNA-binding domain superfamily
Mapman id Description
35.1 not assigned.annotated