Gene: Lsat_1_v5_gn_6_117600

General Information

Structural Information

  • Species Lactuca sativa
  • Gene Identifier Lsat_1_v5_gn_6_117600
  • Transcript Identifier Lsat_1_v5_gn_6_117600.1
  • Gene Type Coding gene
  • Location Lsat_1_v8_lg_6 : 191007898-191009515 : negative

Gene Family Information

  • ID HOM05D000293
  • #Genes/#Species 1516/92
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • id Lsat_1_v5_gn_6_117600.v5
  • pacid 38937144

Descriptions

  • Description PTHR10641:SF623 - MYB DOMAIN PROTEIN 78
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006355
IEA
InterProregulation of transcription, DNA-templated
GO:0009651
ISO
PLAZA Integrative Orthologyresponse to salt stress AT2G47190
GO:1901002
ISO
PLAZA Integrative Orthologypositive regulation of response to salt stress Os03g0315400
GO:1902584
ISO
PLAZA Integrative Orthologypositive regulation of response to water deprivation Os03g0315400
GO:0009414
ISO
PLAZA Integrative Orthologyresponse to water deprivation AT2G47190
GO:0009409
ISO
PLAZA Integrative Orthologyresponse to cold Os03g0315400
GO:0009737
ISO
PLAZA Integrative Orthologyresponse to abscisic acid AT1G48000
GO:0045893
ISO
PLAZA Integrative Orthologypositive regulation of transcription, DNA-templated AT2G47190
GO:0016036
ISO
PLAZA Integrative Orthologycellular response to phosphate starvation AT2G47190

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003700
IEA
InterProDNA-binding transcription factor activity
GO:0043565
IEA
InterProsequence-specific DNA binding
GO:0000978
ISO
PLAZA Integrative OrthologyRNA polymerase II cis-regulatory region sequence-specific DNA binding AT2G47190
GO:0000976
ISO
PLAZA Integrative Orthologytranscription cis-regulatory region binding AT1G48000
GO:0003677
ISO
PLAZA Integrative OrthologyDNA binding AT2G47190
GO:0005516
ISO
PLAZA Integrative Orthologycalmodulin binding AT2G47190

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
ISO
PLAZA Integrative Orthologynucleus AT2G47190

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR001005 SANT/Myb domain
IPR044676 MYB-like transcription factor EOBI/EOBII-like, plant
IPR017930 Myb domain
IPR009057 Homeobox-like domain superfamily
Mapman id Description
15.5.2.1 RNA biosynthesis.transcriptional regulation.MYB transcription factor superfamily.transcription factor (MYB)